Ensemble Empirical Mode Decomposition: Image Data Analysis with White-noise Reflection

During the last decade, Zhaohua Wu and Norden E. Huang announced a new improvement of the original Empirical Mode Decomposition method (EMD). Ensemble Empirical Mode Decomposition and its abbreviation EEMD represents a major improvement with great versatility and robustness in noisy data filtering. EEMD consists of sifting and making an ensemble of a white noise-added signal, and treats the mean value as the final true result. This is due to the use of a finite, not infinitesimal, amplitude of white noise which forces the ensemble to exhaust all possible solutions in the sifting process. These steps collate signals of different scale in a proper intrinsic mode function (IMF) dictated by the dyadic filter bank. As EEMD is a time–space analysis method, the added white noise is averaged out with a sufficient number of trials. Here, the only persistent part that survives the averaging process is the signal component (original data), which is then treated as the true and more physically meaningful answer. The main purpose of adding white noise was to provide a uniform reference frame in the time–frequency space. The added noise collates the portion of the signal of comparable scale in a single IMF. Image data taken as time series is a non-stationary and nonlinear process to which the new proposed EEMD method can be fitted out. This paper reviews the new approach of using EEMD and demonstrates its use on the example of image data analysis, making use of some advantages of the statistical characteristics of white noise. This approach helps to deal with omnipresent noise

Strings with extended non-Abelian gauge interaction

The new generalization of the gauge interaction for the bosonic strings is found. We consider some quasiequivariant maps from the space of metrics on the worldsheet to the space of $n$-tuples of one- and two-dimensional loops. The two-dimensional case is based on the cylinders interacted with a path space connection. The special 2-gauge string model is formulated using two 1-connections, non-Abelian background symmetric tensor field and non-Abelian 2-form. The branched non-Abelian space-time is the result of our construction.Comment: 11 page

Experimental Analysis of Sandstone and Travertine

Sandstone and travertine are sedimentary rocks. The former is clastic, while the latter is sourced by chemical precipitation from hot springs. Their applications in civil engineering structures are mostly influenced by the ability to carry compression loading. A three-point bending experiment is usually used to determine material characteristics. However it does not correspond very well to applicatiosn in structures. For this reason we used a uniaxial compression test to obtain the modulus of elasticity and the stress-strain diagram. To obtain detailed information about the crystalline structure of sandstone and travertine a microscopic analysis wascarried out, using optical microscopy and an EDAX multichannel spectrometer for elementary microanalysis.

Electrical conductivity of plasmas of DB white dwarf atmospheres

The static electrical conductivity of non-ideal, dense, partially ionized helium plasma was calculated over a wide range of plasma parameters: temperatures $1\cdot 10^{4}\textrm{K} \lesssim T \lesssim 1\cdot 10^{5}\textrm{K}$ and mass density $1 \times 10^{-6} \textrm{g}/\textrm{cm}^{3} \lesssim \rho \lesssim 2 \textrm{g}/\textrm{cm}^{3}$. Calculations of electrical conductivity of plasma for the considered range of plasma parameters are of interest for DB white dwarf atmospheres with effective temperatures $1\cdot 10^{4}\textrm{K} \lesssim T_{eff} \lesssim 3\cdot 10^{4}\textrm{K}$. Electrical conductivity of plasma was calculated by using the modified random phase approximation and semiclassical method, adapted for the case of dense, partially ionized plasma. The results were compared with the unique existing experimental data, including the results related to the region of dense plasmas. In spite of low accuracy of the experimental data, the existing agreement with them indicates that results obtained in this paper are correct

Orthology guided transcriptome assembly of Italian ryegrass and meadow fescue for single-nucleotide polymorphism discovery

Single-nucleotide polymorphisms (SNPs) represent natural DNA sequence variation. They can be used for various applications including the construction of high-density genetic maps, analysis of genetic variability, genome-wide association studies, and mapbased cloning. Here we report on transcriptome sequencing in the two forage grasses, meadow fescue (Festuca pratensis Huds.) and Italian ryegrass (Lolium multiflorum Lam.), and identification of various classes of SNPs. Using the Orthology Guided Assembly (OGA) strategy, we assembled and annotated a total of 18,952 and 19,036 transcripts for Italian ryegrass and meadow fescue, respectively. In addition, we used transcriptome sequence data of perennial ryegrass (L. perenne L.) from a previous study to identify 16,613 transcripts shared across all three species. Large numbers of intraspecific SNPs were identified in all three species: 248,000 in meadow fescue, 715,000 in Italian ryegrass, and 529,000 in perennial ryegrass. Moreover, we identified almost 25,000 interspecific SNPs located in 5343 genes that can distinguish meadow fescue from Italian ryegrass and 15,000 SNPs located in 3976 genes that discriminate meadow fescue from both Lolium species. All identified SNPs were positioned in silico on the seven linkage groups (LGs) of L. perenne using the GenomeZipper approach. With the identification and positioning of interspecific SNPs, our study provides a valuable resource for the grass research and breeding community and will enable detailed characterization of genomic composition and gene expression analysis in prospective Festuca Lolium hybrids

White adipose tissue mitochondrial metabolism in health and in obesity

White adipose tissue is one of the largest organs of the body. It plays a key role in whole-body energy status and metabolism; it not only stores excess energy but also secretes various hormones and metabolites to regulate body energy balance. Healthy adipose tissue capable of expanding is needed for metabolic well-being and to prevent accumulation of triglycerides to other organs. Mitochondria govern several important functions in the adipose tissue. We review the derangements of mitochondrial function in white adipose tissue in the obese state. Downregulation of mitochondrial function or biogenesis in the white adipose tissue is a central driver for obesity-associated metabolic diseases. Mitochondrial functions compromised in obesity include oxidative functions and renewal and enlargement of the adipose tissue through recruitment and differentiation of adipocyte progenitor cells. These changes adversely affect whole-body metabolic health. Dysfunction of the white adipose tissue mitochondria in obesity has long-term consequences for the metabolism of adipose tissue and the whole body. Understanding the pathways behind mitochondrial dysfunction may help reveal targets for pharmacological or nutritional interventions that enhance mitochondrial biogenesis or function in adipose tissue.Peer reviewe

Insight into the sialome of the castor bean tick, Ixodes ricinus

<p>Abstract</p> <p>Background</p> <p>In recent years, there have been several sialome projects revealing transcripts expressed in the salivary glands of ticks, which are important vectors of several human diseases. Here, we focused on the sialome of the European vector of Lyme disease, <it>Ixodes ricinus</it>.</p> <p>Results</p> <p>In the attempt to describe expressed genes and their dynamics throughout the feeding period, we constructed cDNA libraries from four different feeding stages of <it>Ixodes ricinus </it>females: unfed, 24 hours after attachment, four (partially fed) and seven days (fully engorged) after attachment. Approximately 600 randomly selected clones from each cDNA library were sequenced and analyzed. From a total 2304 sequenced clones, 1881 sequences forming 1274 clusters underwent subsequent functional analysis using customized bioinformatics software. Clusters were sorted according to their predicted function and quantitative comparison among the four libraries was made. We found several groups of over-expressed genes associated with feeding that posses a secretion signal and may be involved in tick attachment, feeding or evading the host immune system. Many transcripts clustered into families of related genes with stage-specific expression. Comparison to <it>Ixodes scapularis </it>and <it>I. pacificus </it>transcripts was made.</p> <p>Conclusion</p> <p>In addition to a large number of homologues of the known transcripts, we obtained several novel predicted protein sequences. Our work contributes to the growing list of proteins associated with tick feeding and sheds more light on the dynamics of the gene expression during tick feeding. Additionally, our results corroborate previous evidence of gene duplication in the evolution of ticks.</p

The effects of majority requirements, selectorate composition and uncertainty in indirect presidential elections: The case of Estonia

This article assesses the effects of common features in the indirect election of presidents in parliamentary republics. In particular, it examines the influence of majority requirements, selectorate composition and uncertainty on party strategies, using Estonia (1996-2016) as a crucial case for analysis. The analysis demonstrates that the lack of a plurality run-off effectively eliminated incentives for inter-party cooperation and strategic voting. It furthermore shows that shifts in the partisan composition and control of the selectorate from parliament to electoral college provided considerable opportunities for agenda manipulation. Subsequently, results only rarely reflected the parliamentary balance of power. Last, although overall indicators suggest greater congruence between parliament and electoral college over time, this proliferated rather than reduced parties’ uncertainty over the electoral outcome as non parliamentary electors voted based on local interests and acted independently from national party leaders

The youth movement Nashi: contentious politics, civil society, and party politics

The youth movement Nashi was established in Russia with the support of the Putin regime in 2005. The success of anti-regime demonstrators in Ukraine's ‘Orange Revolution’ in 2004 had been noted in Moscow, and Nashi's role was to serve as a pro-regime force to be mobilised against the opposition. Its focus was the contentious politics of the street. Nashi represents an interesting theoretical case from the perspective of contentious politics and its relationship with civil society and formal party politics. Nashi's role has developed to include facilitating young people's engagement with party politics and business. Its early centralised control has been ameliorated somewhat by a reorganisation focused on local action. Nonetheless, Nashi exists with state support. Its continued role in contentious politics in support of the Putin regime, for example, countering opposition demonstrations in Moscow in December 2011, makes its identification as a component of democratic civil society problematic

An ontology-based framework for describing discoverable data services

Data-services are applications in charge of retrieving certain data when they are called. They are found in different communities such as the Internet Of Things, Cloud Computing, Big Data, etc. So, there is a real need to discover how can an application that requires some data automatically find a data-service which is providing it. To our knowledge, the problem of automatically discovering these data-services is still open. To make a step forward in this direction, we propose an ontology-based framework to address this problem. In our framework, input and output values of the request are mapped into concepts of the domain ontology. Then, data-services specify how to obtain the output from the input by stating the relationship between the mapped concepts of the ontology.Peer ReviewedPostprint (author's final draft